BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036H12SP1|AL430317
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1300 1686 0.0
>3x_Contig1300
Length = 6589
Score = 1686 bits (844), Expect = 0.0
Identities = 891/911 (97%), Gaps = 6/911 (0%)
Strand = Plus / Minus
Query: 6 atttcaatttcttctttactcgattagttcattctgagatattgctagtggaagcgggca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3756 atttcaatttcttctttactcgattagttcattctgagatattgctagtggaagcgggca 3697
Query: 66 aaamagttgtgaaattgaaaamagaaaaactggactgggatttgtttctggggatgaacg 125
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3696 aaaaagttgtgaaattgaaaaaagaaaaactggactgggatttgtttctggggatgaacg 3637
Query: 126 acagtggttgcmgccaagactcactgctggtaatctggcgagamaggctactgatacgaa 185
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3636 acagtggttgcagccaagactcactgctggtaatctggcgagaaaggctactgatacgaa 3577
Query: 186 aatttcacacctttttcatataattgtgttccaatttcccctagatactttcaagcgaag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3576 aatttcacacctttttcatataattgtgttccaatttcccctagatactttcaagcgaag 3517
Query: 246 aaacaaaggtaagccaagcmaagagcagatgtmagtgcagctgggaactggccaagcttg 305
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 3516 aaacaaaggtaagccaagcaaagagcagatgtaagtgcagctgggaactggccaagcttg 3457
Query: 306 gaaccggtccatggatcgaacattcctatcgctgtttatttatcttgtttcctgacctta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3456 gaaccggtccatggatcgaacattcctatcgctgtttatttatcttgtttcctgacctta 3397
Query: 366 ttctttctttctaccttcttttccttctggctgttctagcacttacttgaagcggaatgg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3396 ttctttctttctaccttcttttccttctggctgttctagcacttacttgaagcggaatgg 3337
Query: 426 aaatacttcttggtttctctcggccttcacttttggtccatcgcttgtagccgattatct 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3336 aaatacttcttggtttctctcggccttcacttttggtccatcgcttgtagccgattatct 3277
Query: 486 taataaagcgcttattcatatggatatatgtatgamatactataaacgtgtatatmaata 545
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 3276 taataaag-gcttattcatatggatatatgtatgaaatactataaacgtgtatataaata 3218
Query: 546 tataagcgcgctatgamacaatttttgccaaggcttaacttttttttttgatttgcatca 605
|||||| | ||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3217 tataag---ggtatgaaacaatttttgccaaggcttaac--ttttttttgatttgcatca 3163
Query: 606 tatgacagatcattctatagaatggcacgaaattaggaactgtgtccacactgtacagta 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3162 tatgacagatcattctatagaatggcacgaaattaggaactgtgtccacactgtacagta 3103
Query: 666 tctatcacagagtatatgaatgtcgcatttcaaaatagtctttttgacttctctctcgct 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3102 tctatcacagagtatatgaatgtcgcatttcaaaatagtctttttgacttctctctcgct 3043
Query: 726 tgcgttggtgtttgaattgttcaacactataccagtaccgataacatcacatttgttcat 785
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3042 tgcgttggtgtttgaattgttcaacactatatcagtaccgataacatcacatttgttcat 2983
Query: 786 ttcggagtataatggatacaaattcggtgtatttgggtggtgtaaagtggacggatycat 845
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2982 ttcggagtataatggatacaaattcggtgtatttgggtggtgtaaagtggacggatccat 2923
Query: 846 ttgctccccaatacgtatgggatattcattggatgatatccttcycttcaatgataatga 905
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 2922 ttgctccccaatacgtatgggatagtcattggatgatatccttctcttcaatgataatga 2863
Query: 906 ataccttcatc 916
|||||||||||
Sbjct: 2862 ataccttcatc 2852
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7828
Number of Sequences: 1807
Number of extensions: 7828
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)